{ "_id": "6acec6a3d9de2f3f33fc7c92", "Package": "arbor", "Type": "Package", "Title": "Tree Segmentation in MLS/TLS Point Clouds", "Version": "1.1.2", "Author": "Jean-Romain Roussel", "Maintainer": "Jean-Romain Roussel ", "Description": "Semantic segmentation, instance segmentaion and\nQuantitative Structure Model in MLS and TLS Point Clouds.", "License": "GPL (>= 3)", "URL": "https://github.com/r-lidar/arbor", "BugReports": "https://github.com/r-lidar/arbor/issues", "Encoding": "UTF-8", "Config/roxygen2/version": "8.1.0", "Config/build/compilation-database": "true", "Config/pak/sysreqs": "libabsl-dev cmake libfreetype6-dev libgdal-dev\ngdal-bin libgeos-dev libglu1-mesa-dev make texlive libpng-dev\nlibuv1-dev libgl1-mesa-dev libssl-dev libproj-dev\nlibsqlite3-dev libudunits2-dev zlib1g-dev", "Repository": "https://r-lidar.r-universe.dev", "Date/Publication": "2026-10-13 23:20:27 UTC", "RemoteUrl": "https://github.com/r-lidar/arbor", "RemoteRef": "HEAD", "RemoteSha": "c714348e61950ad2e4172ac662c8ffbfefd6639b", "NeedsCompilation": "yes", "Packaged": { "Date": "2026-10-13 23:42:56 UTC", "User": "root" }, "_user": "r-lidar", "_type": "src", "_file": "arbor_1.1.2.tar.gz", "_fileid": "https://r2.ropensci.org/45b1fe8b465843330b3239d396e19754989e84bf1e01422ff0e33aeb9f2fadfe", "_filesize": 18358374, "_sha256": "45b1fe8b465843330b3239d396e19754989e84bf1e01422ff0e33aeb9f2fadfe", "_expires": "2027-01-22T00:02:39.000Z", "_created": "2026-10-13T23:42:56.000Z", "_published": "2026-10-14T00:02:43.368Z", "_buildurl": "https://github.com/r-universe/r-lidar/actions/runs/38485517753", "_status": "success", "_host": "GitHub-Actions", "_jobs": [ { "job": 115600389918, "time": 413, "config": "linux-devel-arm64", "r": "4.7.0", "check": "OK", "artifact": "11859967466" }, { "job": 115600390054, "time": 468, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "11859282785" }, { "job": 115600390040, "time": 376, "config": "linux-release-arm64", "r": "4.6.1", "check": "OK", "artifact": "11859573348" }, { "job": 115600389864, "time": 439, "config": "linux-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "11859473554" }, { "job": 115600390008, "time": 359, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "11860350368" }, { "job": 115600389940, "time": 577, "config": "macos-oldrel-x86_64", "r": "4.5.3", "check": "OK", "artifact": "11860445434" }, { "job": 115600390039, "time": 331, "config": "macos-release-arm64", "r": "4.6.1", "check": "OK", "artifact": "11859853620" }, { "job": 115600389871, "time": 942, "config": "macos-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "11860600248" }, { "job": 115598203277, "time": 398, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "11859646634" }, { "job": 115600389833, "time": 313, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "11859202593" }, { "job": 115600389890, "time": 569, "config": "windows-devel-arm64", "r": "4.7.0", "check": "OK", "artifact": "11860331461" }, { "job": 115600389905, "time": 571, "config": "windows-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "11860107676" }, { "job": 115600390030, "time": 483, "config": "windows-oldrel-x86_64", "r": "4.5.3", "check": "OK", "artifact": "11860222388" }, { "job": 115600390038, "time": 540, "config": "windows-release-arm64", "r": "4.6.1", "check": "OK", "artifact": "11859383976" }, { "job": 115600390026, "time": 349, "config": "windows-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "11860033144" } ], "_upstream": "https://github.com/r-lidar/arbor", "_commit": { "id": "c714348e61950ad2e4172ac662c8ffbfefd6639b", "author": "Jean-Romain ", "committer": "Jean-Romain ", "message": "New slider\n", "time": 1791933627 }, "_maintainer": { "name": "Jean-Romain Roussel", "email": "info@r-lidar.com" }, "_distro": "resolute", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.1.0", "role": "Depends" }, { "package": "Rcpp", "role": "LinkingTo" }, { "package": "data.table", "role": "Imports" }, { "package": "graphics", "role": "Imports" }, { "package": "lidR", "version": ">= 4.2.2", "role": "Imports" }, { "package": "methods", "role": "Imports" }, { "package": "Rcpp", "role": "Imports" }, { "package": "rgl", "role": "Imports" }, { "package": "sf", "role": "Imports" }, { "package": "utils", "role": "Imports" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" }, { "package": "terra", "role": "Suggests" } ], "_owner": "r-lidar", "_selfowned": true, "_usedby": 0, "_updates": [ { "week": "2025-42", "n": 7 }, { "week": "2025-43", "n": 6 }, { "week": "2025-44", "n": 24 }, { "week": "2025-45", "n": 4 }, { "week": "2025-46", "n": 10 }, { "week": "2025-47", "n": 23 }, { "week": "2025-49", "n": 2 }, { "week": "2025-51", "n": 19 }, { "week": "2025-52", "n": 7 }, { "week": "2026-03", "n": 2 }, { "week": "2026-04", "n": 4 }, { "week": "2026-05", "n": 18 }, { "week": "2026-06", "n": 6 }, { "week": "2026-07", "n": 23 }, { "week": "2026-08", "n": 8 }, { "week": "2026-09", "n": 12 }, { "week": "2026-10", "n": 17 }, { "week": "2026-11", "n": 1 }, { "week": "2026-13", "n": 4 }, { "week": "2026-14", "n": 12 }, { "week": "2026-17", "n": 13 }, { "week": "2026-18", "n": 17 }, { "week": "2026-19", "n": 30 }, { "week": "2026-20", "n": 28 }, { "week": "2026-21", "n": 10 }, { "week": "2026-22", "n": 18 }, { "week": "2026-23", "n": 12 }, { "week": "2026-24", "n": 6 }, { "week": "2026-25", "n": 6 }, { "week": "2026-28", "n": 1 }, { "week": "2026-31", "n": 2 }, { "week": "2026-33", "n": 14 }, { "week": "2026-34", "n": 25 }, { "week": "2026-35", "n": 3 }, { "week": "2026-37", "n": 4 }, { "week": "2026-38", "n": 2 }, { "week": "2026-39", "n": 32 }, { "week": "2026-40", "n": 4 }, { "week": "2026-41", "n": 2 }, { "week": "2026-42", "n": 2 } ], "_tags": [ { "name": "v1.0.0", "date": "2026-08-29" }, { "name": "v1.1.0", "date": "2026-09-27" }, { "name": "v1.1.2", "date": "2026-10-07" } ], "_topics": [ "forest-inventory", "forestry", "lidar", "mobile-laser-scanning", "qsm", "segmentation", "cpp", "openmp" ], "_stars": 61, "_contributors": [ { "user": "jean-romain", "count": 600, "uuid": 3872279 }, { "user": "copilot", "count": 10, "uuid": 198982749 }, { "user": "pierrick-marie", "count": 4, "uuid": 667166 } ], "_userbio": { "uuid": 93974705, "type": "organization", "name": "r-lidar", "followers": 119, "description": "R + lidar" }, "_downloads": { "count": 0, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/arbor" }, "_devurl": "https://github.com/r-lidar/arbor", "_searchresults": 52, "_rbuild": "4.6.1", "_assets": [ "extra/arbor.html", "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/manual.pdf", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md" ], "_cranurl": false, "_exports": [ "%in%", "add_dbh3d", "add_range", "add_single_tree_ground", "arbor_parameters_default", "ARBORBUFFER", "ARBORLOW", "ARBORTREE", "ARBORUNDERSTORY", "available_allometries", "colorize_trees", "extract_tree_context", "filter_range", "find_seeds", "flag_buffer", "flag_small_trees", "foliage.colors", "hybrid_homogeneization", "install_cmd_tools", "plot_instance", "plot_likelihood", "plot_passage", "plot_qsm", "plot_semantic", "plot_semantic_instance", "qsf", "qsf_filter", "qsf_filter_broken", "qsf_filter_errors", "qsf_filter_flagged", "qsf_filter_messages", "qsf_filter_nomeasure", "qsf_filter_ok", "qsf_filter_sapling", "qsf_filter_warnings", "qsf_log", "qsf_merchantable", "qsf_read", "qsf_segment_semantic", "qsf_treemap", "qsf_write", "qsm", "qsm_dbh", "qsm_height", "qsm_merchantable", "qsm_message", "qsm_nostump", "qsm_read", "qsm_stats", "qsm_stem", "qsm_treeid", "qsm_volume", "qsm_write", "read_trajectory", "resolve_oversegmentation", "segment_ground", "segment_instance", "segment_semantic", "st_crs", "transfer_attributes", "wood_likelihood" ], "_help": [ { "page": "sub-.qsf", "title": "Subset a qsf object", "topics": [ "[.qsf" ] }, { "page": "match_infix", "title": "Value Matching for 'qsf' Objects", "topics": [ "%in%,LAS-method" ] }, { "page": "add_single_tree_ground", "title": "Adds a set of synthetic ground points below a single-tree point cloud. Useful to perform arbor operations on already externally isolated trees", "topics": [ "add_single_tree_ground" ] }, { "page": "constants", "title": "Constants", "topics": [ "ARBORBUFFER", "ARBORLOW", "ARBORTREE", "ARBORUNDERSTORY" ] }, { "page": "available_allometries", "title": "Available allometric models", "topics": [ "available_allometries" ] }, { "page": "extract_tree_context", "title": "Extract the local tree context from a LAS object", "concept": [ "experimental" ], "topics": [ "extract_tree_context" ] }, { "page": "find_seeds", "title": "Find seeds to perform instance segmentation", "topics": [ "find_seeds" ] }, { "page": "flagging", "title": "Flag Trees for Exclusion", "topics": [ "flagging", "flag_buffer", "flag_small_trees" ] }, { "page": "foliage.colors", "title": "Color palette for semantic segmentation plot", "topics": [ "foliage.colors" ] }, { "page": "hybrid_homogeneization", "title": "Homogenization of the Point Cloud", "topics": [ "hybrid_homogeneization" ] }, { "page": "install_cmd_tools", "title": "Use some arbor features from a terminal", "topics": [ "install_cmd_tools" ] }, { "page": "parameters", "title": "Parameters", "topics": [ "arbor_parameters_default", "parameters" ] }, { "page": "plot", "title": "Plot QSM Data in 3D", "topics": [ "colorize_trees", "plot.qsf", "plot.qsm", "plot_instance", "plot_likelihood", "plot_passage", "plot_qsm", "plot_semantic", "plot_semantic_instance" ] }, { "page": "print.qsf", "title": "Print a Quantitative Structure Forest (QSF)", "topics": [ "print.qsf" ] }, { "page": "print.qsm", "title": "Print a Quantitative Structure Model (QSM)", "topics": [ "print.qsm" ] }, { "page": "qsf", "title": "Quantitative Structural Forest", "topics": [ "qsf" ] }, { "page": "qsf_filter", "title": "Filter a qsf object", "topics": [ "qsf_filter", "qsf_filter_broken", "qsf_filter_errors", "qsf_filter_flagged", "qsf_filter_messages", "qsf_filter_nomeasure", "qsf_filter_ok", "qsf_filter_sapling", "qsf_filter_warnings" ] }, { "page": "qsf_log", "title": "QSF log", "topics": [ "print.qsf_log", "qsf_log" ] }, { "page": "qsf_read", "title": "Read a QSF Manifest File", "topics": [ "qsf_read" ] }, { "page": "qsf_segment_semantic", "title": "Semantic segmentation of a tree point cloud using a QSM", "concept": [ "experimental" ], "topics": [ "qsf_segment_semantic" ] }, { "page": "qsf_treemap", "title": "Convert a Quantitative Structure Forest (QSF) to an sf treemap", "topics": [ "qsf_treemap" ] }, { "page": "qsf_write", "title": "Write a QSF to Files", "topics": [ "qsf_write" ] }, { "page": "qsm", "title": "Generate a QSM from a single tree point cloud", "topics": [ "qsm" ] }, { "page": "dbh", "title": "Extract diameter at breast height (DBH) from a QSM", "topics": [ "add_dbh3d", "qsm_dbh" ] }, { "page": "qsm_read", "title": "Read QSM Data from File", "topics": [ "qsm_read" ] }, { "page": "qsm_stats", "title": "Compute summary statistics from a QSM", "topics": [ "qsm_stats" ] }, { "page": "qsm_subset", "title": "Subset a QSM or QSF", "topics": [ "qsf_merchantable", "qsm_merchantable", "qsm_nostump", "qsm_stem", "qsm_subset" ] }, { "page": "qsm_tools", "title": "Simple tools for QSM", "topics": [ "qsm_height", "qsm_message", "qsm_treeid", "qsm_treeid.qsf", "qsm_treeid.qsm", "qsm_volume" ] }, { "page": "qsm_write", "title": "Write a QSM to File", "topics": [ "qsm_write" ] }, { "page": "resolve_oversegmentation", "title": "Resolve over-segmentation in a tree instance segmentation", "topics": [ "resolve_oversegmentation" ] }, { "page": "segment_ground", "title": "Ground Segmentation", "topics": [ "segment_ground" ] }, { "page": "segment_instance", "title": "Individual Tree Instance Segmentation", "topics": [ "segment_instance" ] }, { "page": "segment_semantic", "title": "Wood-Foliage Semantic Segmentation", "topics": [ "segment_semantic" ] }, { "page": "st_crs", "title": "Get or set the projection of a QSM and QSF objects", "topics": [ "st_crs", "st_crs.qsf", "st_crs.qsm", "st_crs<-.qsf", "st_crs<-.qsm" ] }, { "page": "trajectory_range", "title": "Trajectory-based range filtering utilities", "topics": [ "add_range", "filter_range", "read_trajectory", "trajectory_range" ] }, { "page": "transfer_attributes", "title": "Transfer attributes between point clouds", "topics": [ "transfer_attributes" ] }, { "page": "wood_likelihood", "title": "Compute Local Wood Likelihood", "topics": [ "wood_likelihood" ] } ], "_pkglogo": "https://github.com/r-lidar/arbor/raw/HEAD/man/figures/logo.svg", "_readme": "https://github.com/r-lidar/arbor/raw/HEAD/README.md", "_rundeps": [ "abind", "base64enc", "BH", "bslib", "cachem", "class", "classInt", "cli", "data.table", "DBI", "digest", "e1071", "evaluate", "fastmap", "fontawesome", "fs", "glue", "highr", "htmltools", "htmlwidgets", "jquerylib", "jsonlite", "KernSmooth", "knitr", "lazyeval", "lidR", "lifecycle", "magrittr", "memoise", "mime", "parallelly", "proxy", "R6", "rappdirs", "Rcpp", "RcppArmadillo", "rgl", "rlang", "rlas", "rmarkdown", "s2", "sass", "sf", "stars", "terra", "tinytex", "units", "wk", "xfun", "yaml" ], "_sysdeps": [ { "shlib": "libstdc++", "package": "libstdc++6", "source": "gcc", "version": "16-20260322-1ubuntu1", "name": "c++", "homepage": "http://gcc.gnu.org/", "description": "GNU Standard C++ Library v3" }, { "shlib": "libgomp", "package": "libgomp1", "source": "gcc", "version": "16-20260322-1ubuntu1", "name": "openmp", "homepage": "http://gcc.gnu.org/", "description": "GCC OpenMP (GOMP) support library" } ], "_score": 6.103393169973529, "_indexed": true, "_nocasepkg": "arbor", "_universes": [ "r-lidar" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.1.2", "date": "2026-10-13T23:48:53.000Z", "distro": "resolute", "arch": "aarch64", "commit": "c714348e61950ad2e4172ac662c8ffbfefd6639b", "fileid": "https://r2.ropensci.org/b227cd441f9e44e47e1201a7ac7d8e054cbe86de6733853a109eb9f79ac5917f", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/r-lidar/actions/runs/38485517753" }, { "r": "4.7.0", "os": "linux", "version": "1.1.2", "date": "2026-10-13T23:48:39.000Z", "distro": "resolute", "arch": "x86_64", "commit": "c714348e61950ad2e4172ac662c8ffbfefd6639b", "fileid": "https://r2.ropensci.org/a91ed46e17f0cd0cb40380649bd47c4911cc65d7d42bbeac85030ef28b326732", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/r-lidar/actions/runs/38485517753" }, { "r": "4.6.1", "os": "linux", "version": "1.1.2", "date": "2026-10-13T23:48:18.000Z", "distro": "resolute", "arch": "aarch64", "commit": "c714348e61950ad2e4172ac662c8ffbfefd6639b", "fileid": "https://r2.ropensci.org/c7d77c1248dc98946f09353d2293e612bbb682687d3ad3fdfd0f9f6c47b5b12e", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/r-lidar/actions/runs/38485517753" }, { "r": "4.6.1", "os": "linux", "version": "1.1.2", "date": "2026-10-13T23:48:33.000Z", "distro": "resolute", "arch": "x86_64", "commit": "c714348e61950ad2e4172ac662c8ffbfefd6639b", "fileid": "https://r2.ropensci.org/c38a424cf9cc8f40d26df15ca11f6b7003acb4e3b6eb469e72d4f4556702120f", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/r-lidar/actions/runs/38485517753" }, { "r": "4.5.3", "os": "mac", "version": "1.1.2", "date": "2026-10-13T23:50:13.000Z", "arch": "aarch64", "commit": "c714348e61950ad2e4172ac662c8ffbfefd6639b", "fileid": "https://r2.ropensci.org/2393b374c3482c5dc884f2c97c5462859c91cd3e7aa6ab0b45ce307b2c61028f", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/r-lidar/actions/runs/38485517753" }, { "r": "4.5.3", "os": "mac", "version": "1.1.2", "date": "2026-10-13T23:49:36.000Z", "arch": "x86_64", "commit": "c714348e61950ad2e4172ac662c8ffbfefd6639b", "fileid": "https://r2.ropensci.org/ce515a9d621c939319954bfd1873e52a705c3d906c2b05240e5841047a6a9c49", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/r-lidar/actions/runs/38485517753" }, { "r": "4.6.1", "os": "mac", "version": "1.1.2", "date": "2026-10-13T23:49:52.000Z", "arch": "aarch64", "commit": "c714348e61950ad2e4172ac662c8ffbfefd6639b", "fileid": "https://r2.ropensci.org/f342854a93da095d53557f8bc975bbf12e18199c03d428f71b1e82485ff62e6b", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/r-lidar/actions/runs/38485517753" }, { "r": "4.6.1", "os": "mac", "version": "1.1.2", "date": "2026-10-13T23:49:38.000Z", "arch": "x86_64", "commit": "c714348e61950ad2e4172ac662c8ffbfefd6639b", "fileid": "https://r2.ropensci.org/b4456e9852d72aa229712de95f0981009f35bc14f2c510a6aab7521d14dc9b68", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/r-lidar/actions/runs/38485517753" }, { "r": "4.6.0", "os": "wasm", "version": "1.1.2", "date": "2026-10-13T23:48:49.000Z", "arch": "emscripten", "commit": "c714348e61950ad2e4172ac662c8ffbfefd6639b", "fileid": "https://r2.ropensci.org/6be56ec6375d247b89f6cf52e4a116d1cb282b6f858608cfbd7cc334cf7f01bf", "status": "success", "buildurl": "https://github.com/r-universe/r-lidar/actions/runs/38485517753" }, { "r": "4.7.0", "os": "win", "version": "1.1.2", "date": "2026-10-13T23:49:02.000Z", "arch": "aarch64", "commit": "c714348e61950ad2e4172ac662c8ffbfefd6639b", "fileid": "https://r2.ropensci.org/ae7f45ab76d6bab5a3e34508847b0552e98485dc1f223dc7bbf7945ee4f15440", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/r-lidar/actions/runs/38485517753" }, { "r": "4.7.0", "os": "win", "version": "1.1.2", "date": "2026-10-13T23:47:18.000Z", "arch": "x86_64", "commit": "c714348e61950ad2e4172ac662c8ffbfefd6639b", "fileid": "https://r2.ropensci.org/67e027cbbd39bc885fc23dd22841863bd33bd38c6ddeb32ddad2fd276930bd1b", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/r-lidar/actions/runs/38485517753" }, { "r": "4.5.3", "os": "win", "version": "1.1.2", "date": "2026-10-13T23:47:15.000Z", "arch": "x86_64", "commit": "c714348e61950ad2e4172ac662c8ffbfefd6639b", "fileid": "https://r2.ropensci.org/915c5309c89b018afb457ddcfa38c9f81ca3d685432a3c57593ac774a87f3516", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/r-lidar/actions/runs/38485517753" }, { "r": "4.6.1", "os": "win", "version": "1.1.2", "date": "2026-10-13T23:49:02.000Z", "arch": "aarch64", "commit": "c714348e61950ad2e4172ac662c8ffbfefd6639b", "fileid": "https://r2.ropensci.org/00ebb38c1a3cfc4f73adfb9d1b4c601add7d34d64d45230d27d20ef07135d5eb", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/r-lidar/actions/runs/38485517753" }, { "r": "4.6.1", "os": "win", "version": "1.1.2", "date": "2026-10-13T23:47:13.000Z", "arch": "x86_64", "commit": "c714348e61950ad2e4172ac662c8ffbfefd6639b", "fileid": "https://r2.ropensci.org/9c1e3085ea35e0208fa18870bd360774ee4fb90a5f129f3e250de8800ef3bbe2", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/r-lidar/actions/runs/38485517753" } ] }